YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Use1-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATKLNVNIR TLLANCEELA KSEQNFWRLQ KFIKSLDTML AELEAMGDPQ SVKRIPGYLE  60
   61 RLQALKISTG YADVPGSTTK TPSQSSAVSE TGENALKEIR QLQNSKYHNE LRKELLQDSD 120
  121 ALRRRRGADE SSSSSGSANV QETSGENMNQ AAKYYTNAQE KITEHMLSLT RNLKEQTETA 180
  181 NRIIRRDTEV VSRSAGMADR NINSLGKEAE KLEQHSKKAY KCWLWLMIAF VIATFIGMVL 240
  241 FMKIMKKKKS

Type	Start	End	Confidence
Non-Cytoplasmic	1	221	0.80
Transmembrane Helix	222	242	0.95
Cytoplasmic	243	250	0.69