YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	pck-PD
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRELNKQQSQ DTTDSGVEKG DYPRATNGVV FGAIVTFASF FVLMMSFCSP YWIESYEETR  60
   61 ASFKNMGLWQ YCFKDFVYPK YAFLKQFTGC HNIFSHVSTA NWPVLILVLI FSHSYRSITL 120
  121 SVSICCPAGS WRCRAS

Type	Start	End	Confidence
Cytoplasmic	1	27	0.78
Transmembrane Helix	28	53	0.81
Non-Cytoplasmic	54	92	0.81
Transmembrane Helix	93	115	0.57
Cytoplasmic	116	136	0.57