YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE38579
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNIRVGVFP LENDAQTCFE VPNCKHPGAE VEILKMIFRL IGVNYTMIDV WKKFGQQYDF  60
   61 GSKQKNGNWS GMIGLLQSDQ LDMIGLSMRI APEREEVVLF SYPTRVFETS IQSFPVSSRM 120
  121 LLLIILIATF FISQLYQTDM LAFLSVPLTY SIPFRSIKQA LELVEHQKMY IAAFENQTLL 180
  181 CTPTTCSLFQ KSIDKNPVRR ANKDTEVQDL IKKGGIYQST VDSALLPGQL SWLNVDQKFL 240
  241 IVRDEDAPSY YVAFTFSKKH KKLLKKFNSA LIEVLPAVSL ITIGHGYNTK KKPFEVS

Type	Start	End	Confidence
Cytoplasmic	1	115	0.72
Transmembrane Helix	116	136	0.76
Non-Cytoplasmic	137	297	0.64