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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: nep-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTRFGPPIV FLISCYALIL CGTVDALPRA PYFNDDINKT TTTSEDKTVG NTVVEEEKKT  60
   61 YTVGDSEGYQ EASRLLQKSL NLSLDPCDDF FEYACRAWVD SHPIPDDLTS YSQFTATREK 120
  121 VLAEMRKLYE DNTSIPTSKS IALIKQIYNT CMDTEKHNAV GARDLLEKIK TYGYWPMVHN 180
  181 EKWRESTFDL TKLLSNTIQS RDVSVFFDFG PAEDSRNVSR RLLSFDQGSL GLGYSTRDYY 240
  241 LDEKKYEKQM KAYRKYTIGK VRYYTEDAGM AVNESKIESD VDEIIAFEKE WAQILVAEED 300
  301 RRNYTKLYNV RRFDDLKEYM SIIDWKKLTL STTPFLVHSY LKTNPSIIIS DVEYLQKMNT 360
  361 LLQNTDPRIV TNYILLRWAG SWSQEIGKKY EDLQQEFAFQ MYGRKQRQPR WKDCVSSAGG 420
  421 KLSYASGSMY VRKYFDANAK NTTLDMITDL QEAFRNMMHA NDWMDAETKK YALEKADQML 480
  481 KQIGYPDFIL NDEKLDDWYK GLEGAPEDSF SQLVEKSIQW RNNFYYRRLL EPVNRFEFIS 540
  541 SAAVVNAFYS PTRNAIAFPA GILQQPFFDA RFPKALNYGG IGAVIGHEIT HGFDDTGRQF 600
  601 DNVGNLRDWW DNTTSSKFNE RTQCIIEQYA DVKLRGTDLR INGKLTQGEN IADNGGIKQA 660
  661 FKAYKSYLEK HGGQEARLPQ FESLTNEQLF FVGYAQVWCG AKTPETKTLL LLTDPHSPET 720
  721 ARVNTVLTNQ PEFAEAFKCP AGSPMNPTKR CVVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle