YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE39059
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLRGYSPQT IVAGTLIGGT LAAAVTYAFL TSRNGEEASS SRLVPGLANQ GNTCYMNALL  60
   61 QGLASCPSFV GWLKSLKPQD IGIQGGFVDH LSNLLHLLNE PTGSTLTAQS IVESLKAHGW 120
  121 SITVGVEHDL YELFNVFVTT WEDELKSSRR ILMNQSIENC HSSSSEDDED VVVESTSLRG 180
  181 SPSIIRKLMS FQRCASMARI DASLRSPCVG LTATEYRCCN TNCGYRTVKY ESFTVLTLAI 240
  241 PNSQMGTSTN TESLLRRFFC SEIIRDAICD KCRASDRKQQ GFLKKHGIVK LPQTLMIRIE 300
  301 RVGMLPNGSM KLSEHVHFGE CLSLQDVCFR KNPKINQKSY EESSLHWQLP DGTSRVVGGA 360
  361 EETRSRRSPI HPSQAAIFGD LASNYALIDG GSFVAERREA QKYAYQLRAV SEHRGGPYSG 420
  421 HFVTYRRASA PNHHTWYYTS DAQVTRVPYS HVAACQSYML FYERVKPHRL YERM

Type	Start	End	Confidence
Cytoplasmic	1	9	0.71
Transmembrane Helix	10	31	0.76
Non-Cytoplasmic	32	474	0.96