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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: catp-7
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTSFILFYR GSSIGKIIIR ALDLVTIVVP PALPAVMGIG IFYAQRRLRQ KSIYCISPTT  60
   61 INTCGAIDVV CFDKTGTLTE DGLDFYALRV VNDAKIGDNI VQIAANDSCQ NVVRAIATCH 120
  121 TLSKINNELH GDPLDVIMFE QTGYSLEEDD SESHESIESI QPILIRPPKD SSLPDCQIVK 180
  181 QFTFSSGLQR QSVIVTEEDS MKAYCKGSPE MIMSLCRPET VPENFHDIVE EYSQHGYRLI 240
  241 AVAEKELVVG SEVQKTPRQS IECDLTLIGL VALENRLKPV TTEVIQKLNE ANIRSVMVTG 300
  301 DNLLTALSVA RECGIIVPNK SAYLIEHENG VVDRRGRTVL TIREKEDHHT ERQPKIVDLT 360
  361 KMTNKDCQFA ISGSTFSVVT HEYPDLLDQL VLVCNVFARM APEQKQLLVE HLQDVGQTVA 420
  421 MCGDGANDCA ALKAAHAGIS LSEAEASIAA PFTSKVADIR CVITLISEGR AALVTSYSAF 480
  481 LCMAGYSLTQ FISILLLYWI ATSYSQMQFL FIDIAIVTNL AFLSSKTRAH KELASTPPPT 540
  541 SILSTASMVS LFGQLAIGGM AQVAVFCLIT MQSWFIPFMP THHDNDEDRK SLQGTAIFYV 600
  601 SLFHYIVLYF VFAAGPPYRA SIASNKAFLI SMIGVTVTCI AIVVFYVTPI QYFLGCLQMP 660
  661 QEFRFIILAV ATVTAVISII YDRCVDWISE RLREKIRQRR KGA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle