YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE39186
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVLSVIFWL KMVNSRLILL VFVPFSLAQL SLYGNWTPTV IRYCETLQSA TVPLTGGVTC  60
   61 GSSSYNVMNA FFTLPISSTL SLGLINVGWI TSEALKSQSG FWKTCKPYLV RLFDGIYTDT 120
  121 TNACALMNNP PSGLPNCTED QTNLLYRSGS GYCMKEKVCG AFATIDFLAG PDNSSLLYSW 180
  181 STVTTNALVA SGFKKAGVCY GYKKVPNPGK NDTTMVEGDE QFY

Type	Start	End	Confidence
Cytoplasmic	1	11	0.78
Transmembrane Helix	12	33	0.75
Non-Cytoplasmic	34	70	0.88
Transmembrane Helix	71	90	0.80
Cytoplasmic	91	223	0.79