YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	sulp-7
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.37
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKQNQSWK NYIPITKWLP NYSISENLIN DIIGGVTVGI LNVPQGMAYA SLVGLKPVYG  60
   61 LYTSLFPSLI YMFFGTSRHV ALGVFAVVSL MSGSCNLRVT QEIISNNGTN MTSTEVEAIS 120
  121 INVVKSLGLA VGLIQIIMGL FKANYLISYL SDQIILGFTT GAAVHVLTAQ LNKILGVALP 180
  181 RHSGIGKLFF IYQDLITAII GEKVNVITFG ASVVAIVILY ISKYILTPRF CAKTLVPIPF 240
  241 DLFLIVIGTI IADWFQVEER WGVKVVGDIP TG

Type	Start	End	Confidence
Cytoplasmic	1	27	0.78
Transmembrane Helix	28	49	0.53
Non-Cytoplasmic	50	68	0.41
Transmembrane Helix	69	100	0.66
Cytoplasmic	101	120	0.71
Transmembrane Helix	121	141	0.83
Non-Cytoplasmic	142	148	0.51
Transmembrane Helix	149	171	0.69
Cytoplasmic	172	182	0.41
Transmembrane Helix	183	200	0.37
Non-Cytoplasmic	201	205	0.49
Transmembrane Helix	206	226	0.87
Cytoplasmic	227	234	0.63
Transmembrane Helix	235	255	0.87
Non-Cytoplasmic	256	272	0.72