YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	sulp-7
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSTEVEAIS INVVKSLGLA VGLIQIIMGL FKANYLISYL SDQIILGFTT GAAVHVLTAQ  60
   61 LNKILGVALP RHSGIGKLFF IYQDLITAII GEKVNVITFG ASVVAIVILY ISKYILTPRF 120
  121 CAKTLVPIPF DLFLIVIGTI IADWFQVEER WGVKVVGDIP TGFPNPALPD LFMFRHVIGD 180
  181 ALAIAIVSVV VTVSMGKVIA KKHNYEIDVR QEFFALGIVA STCSMFPCWP ATTALARTLI 240
  241 NDNAGTKTQV RFIFKFNFRN NNAKLEKLKN

Type	Start	End	Confidence
Cytoplasmic	1	10	0.75
Transmembrane Helix	11	31	0.82
Non-Cytoplasmic	32	43	0.48
Transmembrane Helix	44	61	0.70
Cytoplasmic	62	72	0.38
Transmembrane Helix	73	90	0.48
Non-Cytoplasmic	91	95	0.62
Transmembrane Helix	96	116	0.87
Cytoplasmic	117	123	0.82
Transmembrane Helix	124	145	0.88
Non-Cytoplasmic	146	175	0.91
Transmembrane Helix	176	196	0.89
Cytoplasmic	197	212	0.86
Transmembrane Helix	213	233	0.76
Non-Cytoplasmic	234	270	0.77