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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: dop-3
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAGQHHVTD IESPLMVVLW RVAAGVFLPL VPTMAVFGNV LVIMSVFRER SLQTVTNMLI  60
   61 VSLAVSDFMV AIGVMSFGVY YEWNDFKWGL GSFFCHVYQA LDVACSTASI LNLLAISLDR 120
  121 YIAIGHPISY AQYGARGGRA MISITIVWGV SVAVALPLLL GVNPMEENDE CELANPYFNM 180
  181 ISSIFSFFIP CIAMIILYTI IFRRLRQRER ARSLRQAQRS ENDKISSALL GGAQIARQMG 240
  241 KHFKNRTDQI LLEISFQTSS FPTMSESSED ASTISPMINS FNNFLPKKTP YPSTSIPAIP 300
  301 ECGSMPNLTI IERPEAEKEK EISIMDLRDT VEMLDDKYSS AILTSFQTSR SFGEELEEIL 360
  361 PFIDGSNSVK HSREQLHTTR SNTSTTRLLD VKPELRSISV PSIQDEKKLS QKSNDLPFSH 420
  421 QNGTHKQKLL PNPGILMKSK STTLLKTNGY MDTDSLNRNS HKKSLADLLA NDEFSFSDSM 480
  481 RVYKNRLFKS LSRATSGWNK PRPSRHMVKK ATKQMRREHK ATVTLAVVLA VFLFCWLPFF 540
  541 VLHLSNSICL IIDENSACVG FLPLYLATWL GYLNSSLNPL IYTVFDQRFR NAFRNILSCG 600
  601 IFKKR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle