YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	mps-2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITPLPILFF LCIAYILLYI YKHPITPRNS RKKNVLLSLH SLSSLIHVAM FYFLLVQWSK  60
   61 ADNPVLTHFQ IFCLVIIGIG FLIILILIFS IFKSEMKSDS HARRFFHIWP LVHIALSTAY 120
  121 QLFTQIVISH WKTYQIPILY SSYATTVSVC IHLVLHSMAV FWKV

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.88
Transmembrane Helix	6	25	0.89
Cytoplasmic	26	35	0.91
Transmembrane Helix	36	56	0.94
Non-Cytoplasmic	57	67	0.85
Transmembrane Helix	68	92	0.89
Cytoplasmic	93	104	0.96
Transmembrane Helix	105	128	0.85
Non-Cytoplasmic	129	137	0.82
Transmembrane Helix	138	160	0.86
Cytoplasmic	161	164	0.81