YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	nas-2
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFPLLLTLI LPNFVAPKVL EPEKDDEIAV STQREKTFFD MKLILTKLPT FEPSKYGHIN  60
   61 IPLRKKRGIA LHPLQWASYL WPNAEVPYDI ATHYTSTEKS IILSAMEAFK NVTCVRFRPR 120
  121 AATDKHYLQI NKYFNVERCF SYIGRQSSRT LFGTPEGNVE TRMRLDPACL RGNGRGIVMH 180
  181 ELMHILGFYH EHQRDDRDRR IVGSAVHYNF KIYRRAKTLY MGAYDANSIM HYNFQNLPWQ 240
  241 RRDHFSTSDI ININTFYKCK NLLSSKLAPK VPISPTSTST TAITTTNTTT TKL

Type	Start	End	Confidence
Signal Peptide	1	17	0.86
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	293	0.99