YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	hst-3.2
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYRLLLILH LIDLISCGVI PNTSKKRFPD AIIVGVKKSG TRALLEFLRV NPLIKAPGPE  60
   61 VHFFDKNFNK GLEWYREQMP ETKFGEVTIE KSPAYFHSKM APERIKSLNP NTKIIIVVRD 120
  121 PVTRAISDYT QSSSKRKRVG LMPSFETMAV GNCANWLRTN CTTKTRGVNA GWGAIRIGVY 180
  181 HKHMKRWLDH FPIENIHIVD GEKLISNPAD EISATEKFLG LKPVAKPEKF GVDPIKKFPC 240
  241 IKNEDGKLHC LGKTKGRHHP DVEPSVLKTL REFYGPENKK FYQMINHWFD W

Type	Start	End	Confidence
Signal Peptide	1	17	0.83
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	291	0.99