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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: slo-2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGMCPPTPE RPIRRNYARM QYGEKKNIKH KLQQWFIENP SISARIRSCN VLIKLLTCIL  60
   61 YCIRVVNDER SYPDDFPFSE EEAGKQDVTL YKYLLWVDFD FKIWFLQTMF ACISMVYTIL 120
  121 VFYLSYSGSV VRLLINIHFL LELITSFPFI ISIFIPSLTY LYVPVFLNCW LAKGALQAMM 180
  181 NDLNRKSFIS SSALFRQLLL LFSVLACLIF TGMCSIEHLQ RARGKRIDLF TSFYFVMVTF 240
  241 STVGYGDWYP DYWASQLCVV ILICVALGLI PKQLDELGQT WSERQKSGTD FSSWNGVESH 300
  301 VVVTITTLEV EFIRDFLEEF YAHPENQRIQ IVLLSPAELD NQTRMLLKIP LWNNRVHYVR 360
  361 GSSLRDEDLE RANVATSKAC FILSARHVNR KVATDEHTIL RSWAIKDFAP NVKQYVQIFR 420
  421 AETKMHIEHA EVLICEDEFK YALLANNCIC PGISTFITLL MHTSRGEEGQ KSTEPWHKVY 480
  481 GFHSGNEMYQ IKVQDSKFFC EYVGKSFSST SFHAHKEYGI GLIAVSPDGD TSRMKLNPGS 540
  541 SHIIQPTDTV YYMGLTNEES LTDFRKGIRS QQKRANVAST IANIGTVAVD VPRSDKTELV 600
  601 GRKKKKRKEK AADEIHLIEV GEHVQSSRRP SIAMVTEGKI DSSSDSDQEE ICDKCRGPCI 660
  661 QHKLQRTYPQ VRTYIGTSNT VCHMMKERRS LCCLKLDEKC AHKSATSAHE YQWRNRPIIL 720
  721 AADRTSSGMY NLVIPLRAYY RPVHDLHPII ILLELEEQDS LNDAFLDAIS YFPDVYWMKG 780
  781 KVGNLDCLLR AGVSSAEHVV VVKETAVMAE EHTADCNTII TVQKIHRMFP RLRMITELTH 840
  841 ATNMRFVQFN PHNAYSLAQS RFEKKERKRG SHMPFMFRLP FAQGGVFSAN MLDRLLYQAI 900
  901 IKPFVVDLVR LLLGIDQHSD GGYLTSFVIT SDDLWIRNYG RLYQKLCSSV ADIPIGIFRT 960
  961 KKMDTKTVSL DLQEQCKDFE NTEMGRNKDM YDHVKNRMRL LNIKDTHTLL EGSDEKSQIS1020
 1021 YVIINPAQDL ELESGDIVYV IRSPIRKDAT NARINPRRGL RRSKNVSETI DSTNQVPTIV1080
 1081 IDENNL

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