YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ugt-48
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.84
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLRILTFLA VCQVTTSHKI LMFSPTASKS HMISQGRIAD ELANAGHEVV NFEPDFLNLT  60
   61 DKFVPCKKCR RWPVTGLNNY KFKKIQNGLS GDVFQQSSIW SKIFNTDSDP YQDEYTNMCE 120
  121 EMVTNKELIE KLKKEKFDAY FGEQIHLCGM GLAHLIGIKH RFWIASCTMS VSMRDSLGIP 180
  181 TPSSLIPFMS TLDATPAPFW QRAKNFVLQM AHIRDEYRDV VLTNDMFKKN FGSDFPCVEF 240
  241 LAKTSDLIFV STDELLEIQA PTLSNVVHIG GLGLSSEGGG LDEKFVKIME KGKGVILFSL 300
  301 GTIANTTNLP PTIMENLMKI TQKFKDYEFI IKVDKFDRRS FDLAEGLSNV LVVDWVPQTA 360
  361 VLAHPRLKAF ITHAGYNSLM ESAYAGVPVI LIPFMFDQPR NGRSVERKGW GILRDRFQLI 420
  421 KDPDAIEGAI KEILVNPTYQ EKANRLKKLM RSKPQSASER LVKMTNWVLE NDGVEELQYE 480
  481 GKHMDFFTFY NLDIIITAAS IPVLIFIVLR ISNISIITSS PKNKKD

Type	Start	End	Confidence
Signal Peptide	1	17	0.94
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	493	0.97
Transmembrane Helix	494	514	0.79
Cytoplasmic	515	526	0.79