YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	fipr-5
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEQTGKRVK MYTHFGYKSG NFWENKQGPS HSSITQFIMN SKFLLCVLAI AMCSIVREAS  60
   61 AQYYGYASSY YPSYYGGYGY GAYGAYGGYG FGSAYAGYYG KREAGFGPTQ N

Type	Start	End	Confidence
Cytoplasmic	1	40	0.92
Transmembrane Helix	41	61	0.87
Non-Cytoplasmic	62	78	0.86
Transmembrane Helix	79	99	0.88
Cytoplasmic	100	111	0.91