YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	nas-13
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSPTSSSAS VFSSHLFFVF CIFSQIAQSY AQFNRFFDPS IPEQETVLTD YDYNMIGHFR  60
   61 ENDQWFVNDS AMYNPLRFEG DIANSGLNSR SINTFFGDSP LFGIFGVQRN AVRQTYLKWE 120
  121 QARIPYTISS QYSSYSRSKI AEAIEEYRKK TCIDFSPKSA GDLDYIHIVP DDGCYSLVGR 180
  181 IGGKQPVSLG DGCIQKGIII HELMHAVGFF HEQSRADRDE YVKINWSNVE AGLQDQFDKY 240
  241 SLNMIDHLGT KYDYGSVMHY APTAFSKNGK PTIEPIEKNV EIGQRAGFSE NDIYKINMLY 300
  301 NCPTFTATTL APENTKRVKS ITKKVTSATG SPLSKKGEIG SSIGDKGDRG DNSVLSSLIS 360
  361 IHSGLGKCED RRKDCEFLAR AGHCESRFSI RFMTENCANS CGKCIAEEKR KEVCEDARTW 420
  421 CERWANSGMC NQTVFKDYMR QKCAKSCNFC

Type	Start	End	Confidence
Signal Peptide	1	31	0.93
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	450	0.99