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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cwp-5
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRISMLSLFL LTFKAAGATC PCSGITVNGT DQEHCWQIQS RSEATWGSAD DACVAVGGHL  60
   61 GHPLDINYEE ILNYVQKQSS LPVLTGIVAG NTEIPIYGAI CQSNNFYEVV ANTTGFSNTP 120
  121 TSTTTCAYIK TSSSGLVFDS CSIDANVLCD RPLQKQDYCS IIANCSSTTT FLSTTTPVSS 180
  181 TTSNISLTSS STQSYSSSTA GATSSLFTIK VTQSTTAAGN GQGGSGSGSA TTTCKCSAGD 240
  241 VSATTAASAC SEKSGCLKNQ WKIFGMCVDW RAMLALLLIG LLLFLCCCIC HCCMHACMFC 300
  301 TPGKREKEDH EMVLIFYCFI IRDPILPNRS VVAPIPIVAP GKMDYDVEKS EAVILPPPAI 360
  361 QPEPVYITVP EKHESVYGFH TKEIIHVMPE KPTTREIGTM TDPMDTELST IMPVPVAAPV 420
  421 MKRKKVVKKP KKMFIPATED PIEEDLAADI PIEMPESPGA RSVAPLGDVV EPAPMIPLNF 480
  481 SRNPKPMMPE PQSHDDIPLP VNKSRNTVPP PVMQQKPNNA SNNEEFDPSG LRSPPIPAGK 540
  541 PNNGTPKRMT FSPIADESEE ENGARIPSPP RERRASGGRP GNNDGPNLSP NAALDPHPTL 600
  601 KNQRLNEMPS PTPANAPVPS KSPVSGASNN PFANLGGPSP APAADGAGRA PQDDVGMRAA 660
  661 RGRLGGAVRG GGGGGEAPNG WKPWAKGGAR R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle