YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE43224
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRFGVFIIG VLFFMSVCDV LRTEEHSHDE NHVHEKDDFE AEFGDETDSQ SFSQGTEEDH  60
   61 IEVREQSSFV KPTAVHHAKD LPTLRIFYCV SCGYKQAFDQ FTTFAKEKYP NMPIEGANFA 120
  121 PVLWKAYVAQ ALSFVKMAVL VLVLGGINPF ERFGLGYPQI LQHAHGNKMS SCMLVFMLGN 180
  181 LVEQSLISTG AFEVYLGNEQ IWSKIESGRV PSPQEFMQLI DAQLAVLGKA PVNTESFGEF 240
  241 QQTV

Type	Start	End	Confidence
Signal Peptide	1	18	0.87
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	244	0.93