YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	mboa-7
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	12	0.86
Transmembrane Helix	13	32	0.90
Non-Cytoplasmic	33	40	0.70
Transmembrane Helix	41	68	0.73
Cytoplasmic	69	78	0.71
Transmembrane Helix	79	99	0.88
Non-Cytoplasmic	100	153	0.72
Transmembrane Helix	154	174	0.70
Cytoplasmic	175	193	0.86
Transmembrane Helix	194	213	0.83
Non-Cytoplasmic	214	219	0.81
Transmembrane Helix	220	240	0.79
Cytoplasmic	241	246	0.61
Transmembrane Helix	247	266	0.84
Non-Cytoplasmic	267	351	0.65
Transmembrane Helix	352	374	0.81
Cytoplasmic	375	394	0.56
Transmembrane Helix	395	412	0.58
Non-Cytoplasmic	413	423	0.67
Transmembrane Helix	424	441	0.92
Cytoplasmic	442	453	0.92

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENILGLMSK DDWIYTGLLL FSFGASCYVR KIGNNILASG ALGFAMSLFI IGPKIVYSLG  60
   61 ICSIAISIQL LANKKSTPLY VFLTTFTYLM FVRFAHYILP VNEVASHTNV IQLIITLRII 120
  121 GITFEENDAW VHKSDENPTK RYLTELPTIL EKFAYFYHFC GLFTGPYYTY QMLIDSQNPI 180
  181 LKSWDPTLEV KSRFVRLLWS VPVFVITNHY FPLDILRSDA IWEVSFFTRL VYAALIFVVF 240
  241 KTRVYSAWAI AESICVILGI GIYPAASNPK IIMGPTDLNA FDKLKTRENI EMSSDAIVNL 300
  301 DIPKVEFSDG FRDGMKAWNR SVQTWLALYV HSRVKVMRVE TTMLVSAVWH GTYAGYFMSF 360
  361 GVVAMCAILE DVIFKLVPVD TETGVRPKWF RILYTHTIRC RGFEMLATGF LLKNAYDVHH 420
  421 FWSSIYYWLP LLCIPFYIYS AKISKPKKAQ KSE