YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	prx-3
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLASAWEFAK RNKGKIIAGG VLVGSAIAYV QSSSRPKTLE KVSTSSELPN QARRHYIFDS  60
   61 THRSCDQSIT DLIPSIVTQI QARFDVESIQ EKLQNTPDLT AEQKMQLWEQ LKKNAFCRIV 120
  121 SVAFGFSILT LTLKAQISIL AADTCSQFEQ RNKKPTWQNY IPESMNSMWN SRTGSNGLSP 180
  181 TDNPMDVGNR RIFLQCVQYF TLRGIPELME YVAEAIPNEL QNWKLTDIKS KTEMRDFFDR 240
  241 VSYRISFNGL LTKLVAPLDG DGQDNSSSVM KLLQKLTTNL ESSKSIHVLN SLLDFYFSAA 300
  301 LKMVENDEQP LVKYVPAFSN SFPILTSTAF DSPLFNSLYS SDIHQFAVYV FNS

Type	Start	End	Confidence
Signal Peptide	1	28	0.59
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	353	0.96