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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gcy-22
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.17
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFISKCFIC LLFSTYFLPP VNSAVLQVGF LAANDNTTEL APFIGWGQVA GALGVAWSRI  60
   61 VEYGLLPGYE TMNLTWVLTN CREADAVGSV INYAEGHAHV VLGPPCVRPA QVAGSVAKYL 120
  121 DFPLILWGPP FDSSLLNQFE YPTIASTTSS TLYQATSLIR LLEYYKWTEI ALIYYVARSD 180
  181 LIPRCTPLIS DFEGLVNNND NLTITYRRQM SVITNTSYAT ALRNLKELAR VVIVCLESDE 240
  241 ARRNLMISIS ENGMDGDEYV YIMAESRRAG FASSFWNGTD GKNDLALRAA RKFLVMDNQK 300
  301 YNDTTTFVQE VRAAFSRPPF SCPNCTNIDP TVSQVGPLGD ALLLYAYALN RSIATGNPNP 360
  361 TGTEFCEVAK GMEFLGFTGK VIINQNSTRT PLFVVYNLDS TDKEMIVMQI TEDLDDSKDP 420
  421 VASSVNYYIT LVATPAQIWD TWGGTVPLST PICGFTGTDC PKSFTDQYLA IILGCTAAAL 480
  481 VLIIAVISTI VFLVRSKRQE EERLNQLWQV HFSSLVKPPQ KNTMHSSRSL QSTVTTSTKV 540
  541 TINSKKDTER HSFYFLNNDS VVARKHNFRA TFTKNDRAMF RKMRNVDNDN LCKFIGLSLD 600
  601 SPTLISIWRY CSRGSLQDVI AKGSLQMDWF FKYSLMRDVA DAIYYLHHSP IGPHGWLSSS 660
  661 TCLVDERWQV KVSFFGLSAI KQYEVKEQRD FLHTAPEHIR DTNLPITKEM DIYSFAIICS 720
  721 ELITKKSAWD LENETFDIEE LVYKIKKGGR SPPRPSLETE DEHNGSMSLL VRDCWNENPD 780
  781 QRPTSEQIKT LMKSMNHNRS SNLMDHVFNV LEQYASNLED EVQARMKELT EEKKRSDVLL 840
  841 YRMLPKQVAE KLKLGQSVEP ETFDCVTIFF SDVVSFTTLA SRCTPLQVVN LLNDLYTTFD 900
  901 AIIEQHDVYK VETIGDGYLC VSGLPHRNGN EHAKEISSMS FSLLKAIKTF RVPHLPKERI 960
  961 NIRVGLHTGP VVTGVVGMTM PRYCLFGDSV NTASRMESNG KPGRVHISTE CMKFLTEVIG1020
 1021 GYQTEPRGEV IVKGKGAVQT HWLLTDDEIE AKENGESI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle