YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE42737
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRPPVLPPW VATWLLVSGV ICLVDVIYTM FRPYTNAPDG FVSNTLFYGW KLYSSVDIRY  60
   61 ADTKDVVTCS TGRVMLIEIT LNFLAVYLAL KRSRHALLLA FTTSAFVFWK TFWYLVMYIN 120
  121 PPPGTPSFFT DNYGYLGITL IFWIPNGVWV VMPFLAMCSL WNKLALPVEY QEQENNNYEK 180
  181 PPGLSTLSSP

Type	Start	End	Confidence
Cytoplasmic	1	9	0.64
Transmembrane Helix	10	31	0.91
Non-Cytoplasmic	32	68	0.64
Transmembrane Helix	69	88	0.59
Cytoplasmic	89	96	0.77
Transmembrane Helix	97	117	0.92
Non-Cytoplasmic	118	134	0.92
Transmembrane Helix	135	157	0.89
Cytoplasmic	158	190	0.95