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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE41527
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFLLFLIFP HYSTPQTIEY VAASPNPPHG CPNYGLCTDV TTTLVSSTNV STTYKYGCAP  60
   61 ENCYCVDGTT NGTEPCDTIV DQCGNDPCGT PDKFNCTSKI ESYDCTCQAG FTGEKCDSEI 120
  121 GSACATSQCR EGSTCEASDN STTGYTCRCT DKQYGTYCEN DNLCADWPCQ NGGTCSMVLS 180
  181 NSNWICNCTE GWQGRRCETK NSVLSSPVMG KCYKYDYVKI GTHQTKYKDD KMTSDKCNEY 240
  241 AQEKSTDDKT LKYLTLCGEW CMVSEDMLVK DDVSMKDDCK KSCGGDSSEY CGKVNSRCIV 300
  301 YEAGEMETDP NACEDNSTLC GAELGHGMCI NWQSDVTDGF ACICEPLWTG PDCENPVASA 360
  361 CTPNPCVNGT CVLNEQYNKY KCDCDDGFSG DNCEYSKTCT AATCLYGGTC TETNNGGFKC 420
  421 DCLNLYSGNR CEEINRCNYG DPCVNGKCET TVDGITTNYT CTCDDGWTGA NCETMIDFCT 480
  481 PDPCKYNSTC TPKFKGYDCT CLTGLTGANC SEIIDLCVPY WDNEAWKWIK SPCNSKDDMA 540
  541 NCTKKINGFT CSCGEKWTDT LCDLNVLIKD VLMAIYGHVD LTMITLLNDL MQNPSQIKDM 600
  601 VPFITGLLTD SERSDLSWDA GDLFNWIAFE DQRLDLNRDI HKWNDVVLGN CFTFNHRDRN 660
  661 FTYLMRRPGR HGGIQAFMKT RQDEYAPWYD TAAINVFIHN RDDYVFSESV RYNAQPNAQS 720
  721 TINIFMTRYT RLGGNYGKCI KKPSEVKNYY YPGAYTTDGC LRTCYQDRMK EECNCMDPRY 780
  781 PQAPNSTSCQ LSERSCVTEA SEAAGDPSTW SSCVCPLPCS NQEYSVTWSK ANFVNLPITC 840
  841 EKSSDVATCQ KQYKDQLMVS IILPQLDFKI YAETPAMDFN KFLSQLGGQL GVLMGINVVT 900
  901 FIEVVFLFFG MFMVLCQKYE K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle