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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: haf-3
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLLSHLSRL CCSKCSSIPS SSTRLFCFAP QVGRSTGFLK STLIKSKQAF RNVSVVETKR  60
   61 ESYKLKNASW KDLKAILSLA GPYKWRIMLG ISFLGISSSI FLFTPRVLGK LIDEWDETKQ 120
  121 DKMDPNDKAL LLARFFKENP IALAGVFMLG AIAIAARIYC MHTAGQLVIN DLRKSVFNSV 180
  181 LRQDMAFFDK NKVGEIVSRL STDALIVGYS VSMNLSDGAR ALITCFGSGG LMVYTSLAMC 240
  241 KVIFVVVPVI VGTFAVFGKL QRKYTLMMQE AVAGANQVAT ERLSSVRTVR MLVAERKELA 300
  301 AYSDKINEIW QISKKEGLAK GFMFGSFQFT GYLALSSILF YGSNLISQGL LTYGELSSFC 360
  361 LYAVLSAGSL SAMSGFYLEL MKGLGASSRL FELKNREPRI PLEGGVQIGN VKDTIRFEHV 420
  421 AFGYADRDPL FHNISFDVPA GKITAVVGSS GSGKSTIASL LLRLYDPTSG RILVDGTDLK 480
  481 DIDPSYWRRH IGTVGQEPVL FSTTIKENII YGSLEPENVT DAEIVSAADQ SNADEFISRF 540
  541 PIKYDTKVGE HGSTLSGGQK QRIAIARALV NKPNILIMDE ATSALDASSE YLVRIALNKL 600
  601 LANSKQTVMI IAHRLSTIKH ADQIVVVDRG SVAESGSYDE LIAIPDGIFR KLVEKQTFGF 660
  661 KNPESY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle