YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE39472
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNHFSFLLF LLVIGSAHNK KTQYRTERIN FIYEKALQHV TDRQNLARLE KELSGYDAIY  60
   61 LASKSNRQGT QGTKEIDKID DKLGKILEKY GLEKAVLAFK EKYKHKNLFQ QTDDNEPLPS 120
  121 GKFTDQNLQK LWSQAQNGKF SQKELNALHG ELKEVEQKMR VYEDQLDDFK KVPHENSIQH 180
  181 DIESIGDKTK KLKAANRELN DHLDEVHRKV TSEEFSPFNE PRVKRLWKLA QENEKLTPHE 240
  241 LSVLKDELSH FESQLKKIEF HKEEVSRLQE DAEERGKDKS QVYENLELSI KHEKLNRKAR 300
  301 KLEKYIEEKI IIHREL

Type	Start	End	Confidence
Signal Peptide	1	19	0.95
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	316	0.99