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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE43070
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSILYLNCLK LLCVLQIVHL ITADKIVKSP QTVRSVNYED FSLLCADGIP LLMEDHKPRP  60
   61 CQPRPWLKEQ KCPTGFWCHE GQSEHSFYCC PSSRKFANRC HLPPAVGYGK QRMRRFYFDW 120
  121 KTDACHELQY SGIGGNENIF MDYEQCERVC RGAGEPPILL PSNMKVLPKE TTKDFKKMEK 180
  181 PEMEKKMVYP KEVAAPVSLQ PPSLRTTKPA DVHESFYTVS PQTSSVPHPT TLSTTHSKQK 240
  241 PTTTEAEIPE VFDPNPCSLS PDKGFPGSVT VNMWYYDPTS TTCSPFMYLG KGGNSNRFET 300
  301 SEECLETCGI GKPTRKSCEL PPAIGNGPFN IPRYYFDRVT KKCERFFYSG RDGNDNRFYK 360
  361 KNKCERLCLR KKPKKKENIY EFTTTPSTPS VIYESTPLRI IQNLVPSETR ISQSTSTFAP 420
  421 TADIRVHTDP YDYVTPTPTQ SRITVEPWIE RFTEKSSIYE YSTTPHPTLI YEPHGETLPT 480
  481 LNPPTTTTPS IVDHVFSSLM NTQQQKLVEF VHVPTDQKTT GETPRKFSSH ETIPFGQVEQ 540
  541 QPIPMNPFGS AKPTVNKFGM KVEPYQTTDY MLPPGYPSSS IYLPQPAYPE VKPNSSVILS 600
  601 STQSQNNTSP QTIPASASVT NSATSTVVDT SSQFQIPYVS SPASATSNIF VGPIPPPSNS 660
  661 GSSSQAPDSS QSATNSSNSG SGESKIPNVG PIAPPSQLSQ VGVFVTGSTS TSPVVSINFI 720
  721 KTENSVQQPT HYIVPSQSSP PPDPYVISNP IPTLSPTAGT PSFNIYPYPS LPPPTTTISP 780
  781 LPTLLPPNIS YVTSPPDNND SPCSRSIYGD ATIMCENRQE ICPMGTFCQI GQGQSICCPI 840
  841 MDEPPCEQAI EEGVGNVLLR RWYFDPATRL CQPFYYKGFK GNQNNFQSFD SCSRACGATN 900
  901 VCSGGSPQMS VHTHLLSCNF ESDCPYSHDC IQSTPHNLCC PKTSHLVPES IPAPPFEPVQ 960
  961 MPIPAPPAQV SQPQEQSSNM VIDFVPATHA SNNLCGQPID VGFGVLSEHR WAYSAGQCTS1020
 1021 FLYSGHGGNM NNFLTRNDCM KTCQSPMPPP SSQCSQPAAS GQGDQYLSRY FFSPEYRQCL1080
 1081 HFIYSGEGGN QNNFDSLTDC LETCVANGIK FSSLANSPMS AVPPPPPTLM PSPPVTSSPF1140
 1141 TFVPRNMCPQ GDPLITVDGT PIQCDPSKAA KCPGDHVCTP RGNEAYCCPS PMNFCLQSRP1200
 1201 PISVCSGPDF EPVREIRFTY DPLADRCVRF SFQNCRGAAF SPTGSLNNFV SNSQCNRLCC1260
 1261 NQGYNLVYKR RLLMAMNDDP IVEDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle