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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: acy-4
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVERAYNSIR AHKQTRVAQR PVSKKTSSTM RETFGSQVLR ELEMKNRMEC PSLDEILSFY  60
   61 HFPWEKLRYR KNSQKKKRST LYSFYFEQVN SGRIQFSFVI LLSICISEAA FSAFGAEWLK 120
  121 SLILCILTLV ISILSFFHAK RTELVCIASI ISCVIISACT SMRTSVTYLL IFSTYSLLPM 180
  181 SFMLMIFSTF ALTFLVAFIG VLMDYNVGFD IILTRVMMVI LVNVVGSLVY YPTEFVQRKT 240
  241 FHETRKCVQS RMLLDKEMHR QEKILLAVLP KNIAFEVKKD MQETHEERMF HKIYIRKYED 300
  301 ISILFADICG FTNLASEYNP KDLVLMLNEL FARFDKVASI HQCMRIKILG DCYYCVCGVP 360
  361 EYQKNHAINT VEMGRDMIEA IRLVREMTLV NVNMRVGIHT GKAHCGVLGL KKWQFDVWSN 420
  421 DVTLANQMES GGLAGRVHIT DATRSYLKGA YILEEGNGGS RSKFLEKEKI KTWLVVDRSP 480
  481 DYDNICQEAT NHPVMVPWKS TRGISKQERL TGMSTRTRGA STRNGLSEEE VLVENVDSHL 540
  541 RQGIQAIHQE NWKTMHCKNW SLKYKQVRVE NKFVRLKYKD IPFQVTLYVA IVAICIGIKF 600
  601 GLMNLVSFSF VPQMFIVLTS VMIFILTRAL IKHARLVSLV IGVLFILLSI QIVILMGMYE 660
  661 SKFTCDVEKC FKNNYTDFFE IFEICTLATC VILSVDFMTK LLMSMIYFSS FTVLITAKLI 720
  721 RINQYEALLS TYANFCVLSC LTLLLVVFST RRSELISRYD FIWKLQALDE QLQMKRKHEQ 780
  781 NRSVLENILP SHVAKHFVED ATSVSKLYHE SRDNACIMFA TLTEFDKFYI ECDGNNEGVE 840
  841 CLRLLNEIIS DFDQILDQIL DREEFKKIEK IKTISTTYMV ASGLAGRECG DNSHVEAIAL 900
  901 FARELLVKLE STNIHSFNNF NLRIGINVGP VVAGVIGSDK PHYDIWGNSV NVASRMDSGG 960
  961 VAGRIQVTEE VKSILEPLGY NFECRGQINV KGKGMMETFF LLPPEDFDCQ LYH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle