YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ugt-49
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTFLFLLLS LLAVDAGKIL VYSPSISRSH LISNGRIADA LVDAGHDVVM FITEYEPLTE  60
   61 FTGTKKAKVI TMKGFSTKFA EDMDGIGEYL LSSSRLSFLE RLMFEKTCTG ACDDLMTRRE 120
  121 ELEQLRAYNF DVAFSEQIDL CGVGIVRYLG IKNHLWISTT PIMDAVSYNL GIPAPSSYVP 180
  181 TIEENDNGDK MDFWQRTFNL YMKIGSILIH RYGTDGTTEV FRKYIPDFPN VREIAANSSL 240
  241 CFVNSDEVLD LPRPTITKAI YVGGLGIPKV SKPLDKKFTN IMSKGKEGVV IISLGSIIPF 300
  301 GDLPAAAKEG VLRAIQEISD YHFLIKIAKG DNNTKKLVEG IKNVDVAEWL PQVDILSHPR 360
  361 LKLFVMHGGI NGLVETAIQA VPTVIVPVFA DQFRNGRMVE KRGIGKVLLK LDIGYESFKN 420
  421 TVLTVLNTPS YKKNAIRIGK MMRDKPFSPE ERLTKWTQFA IDHGVLEELH VEGSRLNTII 480
  481 YYNLDVIAFV LFVFVAVLHV FIYAFKFLCC KKRSQSNIKK SKKNN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle