YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE39506
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFLLLLFPV LLLAKSPEKR SKVGIDEDNF LQLLEVEIAR TLRSELSSDD DLQNLEGSSD  60
   61 SPEDDYLKKY DLILSSSTTS PKPITTTETT TRSTTTTTTT TTTTAAPSTT TSTVKITPKP 120
  121 LRSTPQCVPE KDCYKDSECP SGKCFGSELG LCDCNACITN KKCSSDLDCG GLRNGCDSNG 180
  181 NCDCVNAFHS HGYKLFVKVL LTFCHQTKCT KTSDNCYGLP CRVGKCKCFV GSGVGSKLPV 240
  241 HYFKPAGK

Type	Start	End	Confidence
Signal Peptide	1	17	0.96
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	248	0.99