YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE40569
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLRDEQVPL LLKRKHVVSG YRPLNQPPSF YFRSAFSSHN EVFNVWTHFI PAIILLFAYL  60
   61 IPEILAPLPR VPVLILQVGI FLLLIASSLA HLMHSRSELD HVFWFLIDFS GIALFGITIG 120
  121 LQRYSSSDDM SLIMKIIYVP LLLVVVLGGQ YFSTCYLFVY KPHYKRRMEL RMGSCFLLAC 180
  181 WLYIPLHYRY QSEGSGGDAA LPLHSRAFQW LVFSGIFMGA HIPERFAPGV FDIVGYGHQL 240
  241 FHLCIDMVAW NLLDAAHIDC SSDEGHVHLP RNIVAVIALF ASIGLIGFNV YRMMQKAITR 300
  301 KYDE

Type	Start	End	Confidence
Cytoplasmic	1	41	0.98
Transmembrane Helix	42	62	0.92
Non-Cytoplasmic	63	72	0.72
Transmembrane Helix	73	93	0.94
Cytoplasmic	94	101	0.87
Transmembrane Helix	102	121	0.96
Non-Cytoplasmic	122	135	0.84
Transmembrane Helix	136	160	0.89
Cytoplasmic	161	169	0.88
Transmembrane Helix	170	188	0.90
Non-Cytoplasmic	189	205	0.79
Transmembrane Helix	206	222	0.84
Cytoplasmic	223	233	0.60
Transmembrane Helix	234	253	0.72
Non-Cytoplasmic	254	272	0.80
Transmembrane Helix	273	291	0.97
Cytoplasmic	292	304	0.92