YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE40480
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTHFINSKC LGYFMILVIL ILSVANYYRL AFILESIEKL PPDTNYPNHQ LLDSDSPIRE  60
   61 LRRAALLSAD QVQREIIENA VGEDNKNFYQ KLRPEAFCPL KIKIGGKGDG GKIVCNPKAI 120
  121 KDDCTLMSLG LNNQVDYEQE IYNITGGNCL LLAADKDPQN MNTLRIFSTL KSHVYVGMIP 180
  181 DNLTIAHIMH SEYKTEVEIL KIDIEGGEHT GLEQFLRDFF VCQILIEIHG WPPEHLDMLQ 240
  241 KISRYGFRIF NIEPNRLCTR CAEYSFINEL CMSQYSVLPL ANMIPRNLTV V

Type	Start	End	Confidence
Cytoplasmic	1	9	0.79
Transmembrane Helix	10	31	0.81
Non-Cytoplasmic	32	291	0.94