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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE40354
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHREHEEMHQ PSRRRRPPRE VERPSATIRY EPVAEPEPWC SFCSWDLILI LLVMLGAGCF  60
   61 ILLHLYLYPN LEKVAPLPNI DPENAPYTWG TYRPHMYFGL RTRSPMSPLF GMMWYEQPNT 120
  121 IQRPHIRHWC NQDDRLPGYY WYEADGRHFG KQNISEAHKG VIQTDWINDA NGFAARVKLN 180
  181 MAPGRRYNVI LYLSAQEIGT RFRLGKHLSD VFHGYNELLG KFTMSLRLKD NTKLQTSHSV 240
  241 MLTDEKIPID RYHDFVVDNT QAYNAPNQPL NYILNEKHND EEGKFIAVQL NLGSQAEFDI 300
  301 ILQTEKLKGM KPEEFTNILR IRSYNFNKKY ENVFQLAGKN YTKTQLKMAK VSLSNMLGSV 360
  361 GYWYGHNRVL FNGIVQPYGP HVLFSAVPSR PFFPRGFLWD EGFHQMLIRK MDSKMTLEAI 420
  421 ASWMNAMDTS GWIPREMIVG SEAEAKVPAE FIPQKNDVAN PPTLFYVMDK LVNDEKTVGR 480
  481 YAGILKLLYP RLEKWFHWIR ITQSGPTRTT YRWRGRNETI KTELNPKTLS SGLDDFPRAS 540
  541 HPSDLEYHLD LRCWLALASR VLNRLAKSYG TDADYQRTAK AMEELNNFDS LVKDHWSEEA 600
  601 QGFFDYGKHS FDVALSPVPT PGSPRQFEYQ RVTSRAPSYT LVSDAFGYNN LFPMMLKLIP 660
  661 SKSPILKSML DKIRDPKILW TNYGLRSISR SSPYYMARNT EHDPPYWRGY IWINVNYMVL 720
  721 SSLRHYADQP GPYRENAENI FSELRANLVK NLATQFQKTG FLWENYDDRT GEGRGCHPFT 780
  781 GWSSLILLIM SDNLDT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle