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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gcy-23
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRELFIFLL LLGECANVKV KVGHIGAVGS MRNAEKILQL SKEQLTQEGV LGNDFDIEIL  60
   61 NQMGCGESYE GVAVGADMYH VQGVRAFIGP YCNAELDAVA KMATFWNIPV VGYMASSNSF 120
  121 ADKTIFKTLA RVSLRTTNSL AEAAAALIKH YGWNKVAIAT NTGAVAFERV QSFEEVFHQR 180
  181 GINVVRKIML EEYTNAKAIM NSGLLQELEN SARVVVCAFS STRDMNKEFM QAVTLSGMNN 240
  241 ANYAWILPWL QLETKDMAPW LGENGEYQQN VKDHFANSFI IDDVNGFDNT LVTPFKERLE 300
  301 ASGYSTDDLE MKNIYGYIHL YDALRLYALA VRATMNETGN ENSYLNGKEV WNHMRRITFP 360
  361 GLVSNAGVTS GTVMMDDIAE RAPVYAAFYV PPNSDTVRKV CELEPVMLTN CDGTKTGNGC 420
  421 YELQVTDLST GFWPSIDGSL PADEPACGFR NEKCDYTTLI IGGCIVLLII LLIICFFILS 480
  481 RVCENRALAN TPWRIYRDDF RTIQENEMKS MLSIGSSKTK MSNMSMFVKH HAVVGTNTHA 540
  541 SFHLYPQRRP IVFNRQDLQL LNQMKQAVHD NLNPFLGMSF NEKEEMVVLW KFCSRGTIQD 600
  601 MIYNQEVSLD SKFHGAFIRD ITLGLEYLHS SIIGYHGSLT PWSCLIDRNW MIKLTDYGIA 660
  661 NPLERWEKLG LISTETLKEG DDKSGSAQKT SLLYQPPEML KNKESNRTRR MDQSWVKQSQ 720
  721 ARRQMGDIYA FGMVMHEILF RALPFPNGTN VSEVMDYIRD GTKTFRPTVH DRTQIHPDLV 780
  781 ALLLDCWNEN PEVRPSIRRV RLNTENYLKV KGSLVDQMMR MMEQYANNLE KLVAERTGML 840
  841 EEANVRADKL LGQLLPKYVA NELKMGRSVP AKTFDMATVM FSDIVGFTTI CSSSTPLEVV 900
  901 SMLNSIYSKF DDAINKHGSY KVETIGDAYM IVSGIPEENG NEHIRNICNT ALELMLLLKT 960
  961 YEIPHRRNVK LRIRLGIHTG TVAAGVVGLT APRYCLFGDT VNVASRMEST SEPEKIQMSQ1020
 1021 EARDFCVRYY SEFQITLRGT VEAKGKGPVT SYWLLGKQSE SQMQQQNFSQ LGI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle