YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE38080
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMMNMSMTT MSGPVAKRHR MWMWYHVDVE DTVLFKSWTV FDAGTMVWTC FVVAAAGILL  60
   61 EALKYARWAT EERMKIDQEN VDSKTKYGGI KIPGKSEKYN FWKRHIIDSL YHFWQLLLAY 120
  121 ILMNVYMVFS VYICLSLCFG LAIGHFVFAS RTGSSL

Type	Start	End	Confidence
Non-Cytoplasmic	1	43	0.48
Transmembrane Helix	44	65	0.87
Cytoplasmic	66	115	0.77
Transmembrane Helix	116	149	0.77
Non-Cytoplasmic	150	156	0.52