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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gcy-8
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.91
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTKKAFLLL TFNVLIYLAA CQETERILAN NGTEDNEITT SKGVSPNTNP LFLSNSTAGL  60
   61 YDSKGRIRLT IGHIGAIGAL RNDVKILEVS HKALQAEGIL DDDLDVEIIS QTGCGESYEG 120
  121 VAVAADMYHL QKVKAFIGPY CNAEMDAVAR MAAFWNIPII GYMAASNNLA DKNAYPTLAR 180
  181 ISLRTTNSIA EATCAMLRHY GWNKVAIITN TGILAYDRVL SFEEVFHQRG INVVKKIMFD 240
  241 EFADSKAMIA SGLLNDIKNS ARIVVCLFSN TRESSREFLT AANTQGMNVN EYGYVFPWLQ 300
  301 DGGKDASPWT GADGSMLQKV KDQYANAIII DDVNSFDNTI VGPFIERIKD VGLTEADVDI 360
  361 ANIYGYLYLF DALKLYAIAA RKVLNETGKA ENLLNGRMMW QNMRKLKFVG MVGASGIASG 420
  421 QVSMDDRAER APLYRGFFVS PNSDSVLPMV HMEPTMLDNC DGIANKSGCY EIVVTDIMRD 480
  481 FWPSVDRKMP KDEPDCGYRN ERCDYTLIII GAALILLFIV AAVSAFFAQK ILEKRALDKL 540
  541 PFRIYRDDLQ FIDEEQLKSM LSLGSTRTKM SNMNYGSRNH AIVGTNTHAI YHKYVQRRPI 600
  601 VFNRADKTLI QLMKAAVHDN INPFLGMVWN EREEMLLVWK FCSRGTLQDI IYNESIQLDT 660
  661 KFHGAFIRDI LAGLEYLHAS QIGYHGSLTP WSCLIDRNWM IKLTDYGIAD PLERWEKSQS 720
  721 ISRDGLTSDD DKSQATQATS ILYESPEMLK NREKNRVRRV DQDWMRQTQT RRQLGDVYAF 780
  781 GLVMYEIIFR ALPFPEGTNQ SELVEWLRDG SKVVKPTIPQ NKVLNMDLSA LIQDCWNTTP 840
  841 EMRPSLRRIK LNVETYLNIK GSLVDQMTRM MEQYANNLEK LVAERTGMLE EANQRADRLL 900
  901 SQLLPAYVAN ELKLGRPVPP KTFTSSTVLF SDIVGFTEMC QNASPLEVVA VLNGIFDGFD 960
  961 QFIARKDAYK VETIGDAYMV VSGVPEENGH RHINEIASIA LDVHKFLSEF IVPHKRDTKV1020
 1021 QCRLGFHTGP VAAAVVGLNA PRYCLFGDTV NMASRMESNS EPGKTQISET AKNLLLKEYP1080
 1081 DYICEQRGEI PIKGKGLCMT YWLMGTKSEG SGRSGAYLAP SMKSAGTGFT GMLGNSANDY1140
 1141 SLNLKNPTGL QR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle