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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE44251
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGGRFRVQS VADGGGGGAG SVGALDSVSD SNLAVNSATK KENEGAERIP LCEQHSPLAL  60
   61 YEQDYDTQGQ KIGTMLRKLS VYNATEATSV EADEKPKAAA AKMGTIMGVF LPCLQNIFGV 120
  121 LFFIRLAWII GTAGVFQAFF VVLTCVSVTF LTSISLSAIA TNGVVPSGGP YYMISRNLGP 180
  181 ELGGAVGILF YLGTTIAASM YITGAIEILL LYIYPQAKLF DDIYHNFRVL GTVLLLILGL 240
  241 IVMAGVKFVN RCALPLVIVV ILCILSAILG VFVRYDGSDS LKFCMVGDRP VDLSTYFEKT 300
  301 QVQPNCTADG LQDLFCSTNG TCDHYYDRMK NIKVWKSSGM PAIREERAIK GIASGVFFDN 360
  361 LWPKYLRAGE VLSKDRKDKG DLNRGGHPSY IYAESVTNFM ILVGVFFPSA TGIMAGSNRS 420
  421 GNLRDAAKSI PLGTLAAQNF SSFIYLLGVV LFGASVSEMF IRDKYGRSAM GKLIISEISW 480
  481 PFPQVILFGC FMSTAGAGMQ SLTGAPRLLQ AIAADDVLPF LKPFRKMDSR GEPIRAILLT 540
  541 LAICECGILI AVIENITALI TQFFLMCYLG VNAACALQSL LKSPGWRPGF RYFHWSLSMI 600
  601 GAILCVAVMF ISAWHFALFA IIIGAGVYKY IEYAGAEKEW GDGLRGLGLS AARFALLNLD 660
  661 DKPQHSRNWR PQLLVLAPDV ESANTNGILS FVSQLKAGKG LTLVAHCMEG EYADNYLKAQ 720
  721 AVQEKLKAVV KKNKIKGFCD VLVTSNVIEG ISCLVQTSGL GGMRHNTVVL SWPNDWKAEQ 780
  781 EWVVANKFVS AIRAISAAKC AIMVPKYAEK FPANGTKVSG FIDVWWVVHD GGLLMLLPFL 840
  841 LRQHKTWKNT TVRLFAIAQM EDNNVQMKTD LEKFLYHLRI DAAVNVIEMT DSDISDYTYE 900
  901 RTMKMEERNQ YLKNLNKSDR DKDIQNHLEI VTRERKLSRI NEEAPAVVPE QRNLEVVDEE 960
  961 QEDGKSENGS AKIEHKGVRF SDDEDSKEVK VGNGTLERDR EERQRKRRYN VHKMHTAVKL1020
 1021 NELMRQKSSD AQLVFVNLPG PPDADSDSYY MDFIEALTEG LDRVLLVRGT GAEVVTIYS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle