YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE43526
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTLSVLIET SSCSWGMLAS AHGDRTIGII LRAIVSFCNA HLGQSANNQL LVFAYGRNVD  60
   61 NKMIYSSTRC EDRNASFLVV KRLRELLSSD ALTNDATIGA PLGPALAHAF CHMKKDSRVV 120
  121 TADPCDDSLG PQTTSEQSET ASEKATNRAV VISITPIMGS EHGSLMNLFF SAAKQSICVD 180
  181 VVSMGDDFTG GILQQAADIT GGSFLHAKKP QTLLKILMTN MLTDPTHRAV FSKLSHNSVD 240
  241 YRASCACHHQ LVSSGWVCSI CLSVLCQYTP ICKVCKAAFT IANLPIKPNR KRAIRN

Type	Start	End	Confidence
Signal Peptide	1	23	0.89
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	296	0.99