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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE43595
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTQDLFLLL LLLLLTSCAA QIDGLRDKRQ TGSGRVGDAC AFNTDCLAGM FCNGGLCSCL  60
   61 TTYIAAEGYC YQKIDPGQPG CVYNEQCASV WPDAFCDTSA GVGTCRCGEN KVERATRDGH 120
  121 VCLDVLDANH NTLAITCPLP EGAGYTSALS DPKHPRQNDG PGPVLCNTDS TNTNQGDEQA 180
  181 GDGNSACLFP SNGQYIADQY DCVEFVSSLD LTSSGYSEKA NGICCPNRAF TCVQPTATGP 240
  241 NPTEPRWWYN SITGMCQQFL WDPSASGSGE HSPNNFRTVE HCESFCRDTC SRGAPEYIHR 300
  301 TSFLEQTPIT GCSQTSACSH NYECKSVGST QWCCPTVASV CGPVGGRPLD PSVNNRGTVY 360
  361 HSGVEKQGTA TSTRFFYDPQ SGKCSPFTYL GAGGNYNNFL SRIDCELYCA RLQCDRGNPL 420
  421 RIGDVTQSCA SNNDCPSSHE CKMDQAVCCP RMQTICTQPL RVGNCDRSVR RYWYSAATRE 480
  481 CQSFEYTGCQ GNDNNFETLV DCQTFCRNAA PEPRCPQGQA YKDNQGKFVT CTTNRQSSSC 540
  541 PANFECYFDG NMHGCCPTKA FTCSLSPSPG KTCGPGVSFK YHYNPQTQEC ESFEYLGCDG 600
  601 NSNTFASRAE CENYCGVGGC ANGGSPLRDS NGALQSCSER DGGCPSSHEC YGVSLGPDMM 660
  661 SYRCCPTKTY ICGLPPQQGS SLCSGGLTVV TRYYFNIVTR KCSPFVYNGC DGNPNNFASL 720
  721 NQCNNFCMAS ACNAGDVVYL NPNTALPISC NDELQNNCPK SFQCIYDSLT DQSVCCGATD 780
  781 MGVCPDNEKA YINSMDGTVR ECLINEHNSC PKDYLCRFNA IKNRYFCCGS MSKANYCPTG 840
  841 RAPFKDQTSL QPTRCTMHAA TSSCPDGFEC LSDLKDALQG YCCSVSEICP HREEYFIDET 900
  901 SGMPRSCTIG HFVTCPAGFQ CMAQIDGSMG YCCKGQPQLT ASDGCPPGEI VYMERNEVAT 960
  961 CDPFNPHNQG CPGTFSCQWS IRTQRYQCCG SDPLPTPMEN DGCPTRQIAY TDPDTKKPKI1020
 1021 CTSASLSCPA GYFCQFSNQN KQFQCCGMPS DCPVQMVAFI GITGEAQACS MNGGSACPDG1080
 1081 FSCVRGKSGA ELCCAGGETC EASQVPVNGV CLNRVLIGEQ CEETPQCVGE SHCIAMKCSC1140
 1141 PTGTIEQKQQ CMDVSIEREI KCTDKQVKVE DECFPLVTLG RSCVHSAQCQ GMGQCIDGVC1200
 1201 DCDESSVRKG HRCDKKQSVR PSLPMNVNKF ATGSPHVMKQ IQPPMSSTSS AVITTTSSNW1260
 1261 QPQPGHAEIM NEGICPAPRQ PYLANGIARQ CISGQPCPVG YSCTWSPQAK NYFCCAANKL1320
 1321 VMRTYVLKDV CDGGEALLFP ATKAPVICTR YATCPPGYFC RRSPKTKQTH CCKKRQPLNM1380
 1381 QSYIIQIKDI TSKRPEPLRM AHSIASAAVQ MASQYMHPGR RRQKPQPVQK TKPVKNVKPT1440
 1441 KTTLPCPPNQ VLLEMEVNRK IIKRCQATCP VSMRSVNGVC KIERRPPVVT Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle