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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ptr-9
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSLNFQSVV SQFFEYESTV VVRWPLPFII IPPLLTFSIV TLTVTNFHLN VTNDTLQVFL  60
   61 PDDMRSLRDL KELLRLFPPR DAQRDTYSIF GSKFVYTVIE DDSSDGNILS SSGIQRMSKL 120
  121 HKFVMGLETS LGDNVASNCL RNKDDEACTM HPIAFALEDT TPEFAIQFLL RYPNLKFGDF 180
  181 VIDNAMVFGD VRIEPKSQDR DGNSPIRSSK AVRMTYILES SESTERWIDL FLSAIPRYKE 240
  241 TNSTIFWSSS KSLAKEMERN GELLIPWMPW TSLVLVVFCM FACSSLNIVK SQPFIGFFAM 300
  301 FNATMATIAS TSLLLYLQYP FLPLVFIMPF LVVSIGTDNM FLMLKSWRMT KKSSNEEQRY 360
  361 IHALTESAAS LFLTSLTDGL SFAIGSISDF HAVRVFCTYC AMAILFMFLF QVTFFNAVMS 420
  421 LCCRREVSGK HPVFCCYEIT PPEETQVLEK QSNFDFSSIV AKHLFKILNP LPSRIGVFFI 480
  481 FLAYLFISIH FAIGLPLGLD LKLLAPDDSY VSKELEAQER LFADYGGFCF ALVRAENISL 540
  541 KDPMVRRNLI GLYRDLGGSE YSSPSEFWLD PFEKKNRGKK YSESDFSDEL HTFLAKEPHL 600
  601 KFRNDIRFTM MGKIEAMKMM FRVRKLGKDN DAPRAEYMRK VMENSQFNGF VYDTSFLLVD 660
  661 QQMTTVYNVI VDVVSAILTM LSICVLMVPR PVSAMCIAFA ILSVNIGVIG ALAATNTRLD 720
  721 IISMITIVMS VGFSVDYVTH TTFHFVIQRD NRLEKCLLVM TEPILQSALS TAIGVSLLSF 780
  781 VHSYIVRTFV NTVFFVVGLG ILHGLIFLPV LLDTIVPDSE YMVPYEPQHE DEENPNHYED 840
  841 LYGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle