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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE43273
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.42
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGGDEVLVV LLIHLSLVFS LHPFSGHQRY RRQILDEPNQ QIDLNITVPY IFSARLYTYG  60
   61 ANRGDISIHG RQEIYKLENP IHFMGNVYES VYISRDGSVG FTEKRQKPSA LPVEEPTIAV 120
  121 FWQPATLGNV WYRETSDINI MNLAHNEVNI QYRYGAQFRV RSVVLITWEG VKDPLVPESE 180
  181 GNTFQLALII GDSMTFAHFI YSKLNFNTNA IAGFSTRDSS YSLPDSATND AILLSEKSDI 240
  241 GIPGEWLFRV DGDRIYLCGA GFKGLECIES CAPSQWFNDC SKSCHCDGGD SCDQENGRCP 300
  301 NGKCSPGWIG EPICDEDMDE CEMGIDNCPN EQPDCLNTPG SFLCLCFEYD EAQQKCKNSK 360
  361 AAPPSAPIPV DVIPMHPTFT RKPTPPKVTA PPRNRFKSTT AATSPTFITE TTTRQTTTTR 420
  421 EKSISTPLLT TEVVTRPSPT TTVVTAPAAC ARCDQNAKCS NGVCTCSEGF TGDGFRCYDV 480
  481 DECEIPGAVC RDHSICSNTI GSFECTCHGG YRFEDGKCED VDECRELPKI CGDPNKGTKC 540
  541 INKDGTFECL CKDGYEGDPS SECRDVNECK NPDACGPNSQ CTNTQGGYEC ECLAGFERIA 600
  601 EGAHCTDRDE CAVEPCHPAA ICSNTRGSYK CECRDGFVGD GKTCHETILY PISNDSTVIP 660
  661 RSWDSSTAVP ILSEITIFGK KYSKIYLSTN GIISFDGPLQ GLIDHAETLK KPAIFALHAQ 720
  721 FDYIREGLVA YTFINDTDAV TLPLLMRSSI GIQTAMGIEN FQTKRLHIFT FDRVRQSGSE 780
  781 NFNSFQIVLA ESDKDATILS LIYEKVQARG PMTGISTPSR FLMLPNNRLA SGSNVGQPGK 840
  841 WMYRVDIADL QTCPPGRLGE PLCDRECAAG HYGINCESTC HCDGSVACDV ITGMCPGALC 900
  901 RAGWEGSSCD QDIDECEMSL VTCAVGSQCV NTRGGYRCDC KGGFAPVGKE CKPIDRCLSR 960
  961 FSVPCSRNAE CVESIESNPK CVCRKGYHGD GFRCTTRDNI KSAGGNILIS DLTHHLMEVA1020
 1021 SDGTNSTDLP GTGLSENPFV MKNWVSDRIG ETTTPVSQRP KFVTVQTPPL FYTAPPIKPK1080
 1081 INDKDMDLSD GEKPTAELSD GVSSVYVFIC VALLSIWAVL IILVIGIMYI NKRKRRNMER1140
 1141 QQYAAMRGWK GGQFHSRSSR MITTSNPNVI YGQTPRITPY ESY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle