YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE39981
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIATRLISK ADEAKKQKVF VALGEDFFEK PAKSRNKLNS IILFTLTALT FYIIGYLVQQ  60
   61 RTSESLPTTF QWKTPKYTIQ TTEEFLDWRD KGIVGPVKDQ GKCNASHAFA ISSSIESMYA 120
  121 KATNGSLLSF SEQQLIDCDD HGFKGCEEQP AINAVSYFIF HGIETEADYP YAGKENGKCT 180
  181 FDSTKSKIQL KDAEFVVSNE TQGKELVTNY GPAFFTMRAP PSLYDYKIGI YNPSIEECTS 240
  241 THEIRSMVIV GYGIEGVQKY WIVKGSFGTS WGEQGYMKLA RDVNACAMAD FITVPTEFK

Type	Start	End	Confidence
Cytoplasmic	1	37	0.98
Transmembrane Helix	38	58	0.91
Non-Cytoplasmic	59	299	0.99