YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE44379
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCTIIERNLE TIRSPKEVST KTVICRICFD NDTSSDSLIK PCSCSGTVAY VHNGCLEQWV  60
   61 RTTSNIQCTI CQDMFELIPA GLKDWNKITL PRPLSEQLED YMEFGCTLAW VVYMLRFAYV 120
  121 GLRYGSRSMI ENVDMAIGTG MMRSFWWMTF WFNFLYYGAM CFVFFEKWLI DNTIFKFKDR 180
  181 SGSPSSQISI ASRSSKRGMK MPINAH

Type	Start	End	Confidence
Cytoplasmic	1	100	0.85
Transmembrane Helix	101	120	0.72
Non-Cytoplasmic	121	144	0.64
Transmembrane Helix	145	170	0.80
Cytoplasmic	171	206	0.72