YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: aff-1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.95
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLWQWSIAV AICLVMVTEA RLRRHHRKRR FVSSNFDEFY CGESAHAQSQ FEEERESNSS  60
   61 KVSSVHSTQF NWGLDNTICI KLQNVVHVLK YERLEQRYPI ENSYTFSVPL IDTNCKCHCY 120
  121 GFGTNDVCNV EKYADDRNCT TSSEFPTCYT KYHPAVEPLD CPVTSIPAKA CCDIKLKPRD 180
  181 GRMFRAVKLQ QPINDMIISH SIFANNSGKM MKVLGPDEFR INLLKGKEQF ELTEYHRISV 240
  241 QLVASSPQQQ LREGMYYFPE ENHNDLREGK INEITESDLD KLGWYRRVGN DWQVATSGLL 300
  301 LRNAHKVVIK NCKGQVHMDQ FSGTKNFVLR GTQYNDTYNE RRVSDNNFVR SVKVDESSRE 360
  361 ITIVHEHGTA AQVSLKTDTR PNLTKSQSLL ANFTGSITLD HDGNRMLNVT FFGVKGTVHI 420
  421 KMYVNDRKLI ATFACTAQFG TSLKDDGSRI SLPSTINQAQ WVCILPDEQP TKSEICKWIP 480
  481 YEEKAMRTPR QEQSWSKGHS PCSQAECNSL KSGVSDLFPW IMNFDYFMAH GGDFTEWLKI 540
  541 GIHIVIAVGL LLLLILLFTK CLVPLACCSL SIPFKNRNKK KKKKNSSDY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle