YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE41633
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARFSGKVAL VTGSSNGIGR AAALLFAQQG AKVTITGRNA ERLEETRQAI LKSGVPAENV  60
   61 LAIAADLATD QGQTDLINGT LQKFGRLDIL VNNAGAAVND PQGRMGIDQQ IEDFDKTFQI 120
  121 NMRSVVTLVQ KAKEHLIKTK GEIINVSSIG GGPHAQPDMM YYGMSKAALD QFTRSTAITL 180
  181 IQHGVRVNSV SPGGVYTGFG EAMGFPPGAL EKIMKYFESH KECVPCGHMA QPIEIAQVIA 240
  241 FLADRTMSSY IIGQSIIADG GSSLLMGMQA HDMMEILKQP

Type	Start	End	Confidence
Signal Peptide	1	21	0.83
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	280	0.97