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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE41892
Protein type: Transmembrane
Type Confidence: 0.58
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMKKVKEKL SSPWIAFALN LLLLIVFLAL VTVHIKMTID VAPVFKSDDP LPRGDPDQKP  60
   61 ATIDSETQTV DEPRNVCESP ECITLAHELH NYKDPSVDPC QDFYQHFCGK FYEHSAIGQG 120
  121 RMATKRSTLS KLIREFLLKN KTSTSKSENT MKQVYAKCRE LQKISDLNSI PPQALLDIFS 180
  181 DIKKIGAWPV LDKDWDGSKF NLNEMLRQLV NLGETHLGFF HFDFIARPYV LIKPPLKQGV 240
  241 QKSVLEKVVK MILEANEIKM DQGFSEDLDE YFELSNRIKI DKLPRTSRSI VGLLPDVRRI 300
  301 NFRGLILEMM PRSKMNRFLG TLFQKVVTYH HPLFVRDNET NHLDTIIRST SNRALANYLI 360
  361 FNFIHSSIKF LTFGLKSDRE RCEKIVVQEL PRPSLRVFMR NCVDKGNREE VAKLTETVKE 420
  421 NVLEMIRESD SFTPSVKKRV LKKVEAIGAI IGYPDHFDPP GTLDKEYENL TLDASDSYYK 480
  481 MSQKLHQLRL QHQMEFLAGQ TPLSPSDQVL EVNAHYDSKD NALTVLAPFL DDPFFDSTYP 540
  541 EYVNLIFTGF LIGHEFGHSI DPKILRRDGW YKTEDMTEYG KRAQCLIDQY DNYDDPDHGK 600
  601 QMNGTYCIGE IVGDWVGRDV TWRAFKKMDL SKMQKLIGFE DKNLDQLYFR IQSLFFCGPR 660
  661 SMKSLEQLLS DPHPTEVFRV NGIYSNMPQF AKAFNCPIGS PMNPEKKCKM F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle