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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: plc-3
Protein type: Transmembrane
Type Confidence: 0.53
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQHGSLGPSS SSRKTTVTST AGSVHLHHRS SNGFSTASRA QLNRHNEMDF GKMFAAMEKG  60
   61 HKVCKIAVLK KWDPAYKQLT LDRYSRQIFL TKLELSAVRN KPTILDIRQI REVQTLNYKL 120
  121 NTIKVDDKWK KDREIVNFDS KAILIISYGM GFALSYWILL FESEDACKLW SQGLHNLMMD 180
  181 TRDRDSSPHP LRIERFLHKH FLSLMSPAND AVARKHMKPF VQTSLQFKVQ SDQLQQVTED 240
  241 QMNSDQFSFA SRQLIHVPEL FSSRFADLAE KHERKGLVVT FQNFLRFLDG KQFDELASNR 300
  301 TRALEFLNRY FQEDQAYFGD RNEPSMTVFE FCDFLFSREN SLWDPTNEKV THDMSRPLSH 360
  361 YWIASSHNTY LTGDQLRSES SLDCYAQALL MGCRCIELDC WDGQKKPGSA EFIDIVIYHG 420
  421 YTMTSKILLR DVLHVIRHYA FVTSEYPVIL SIEDNCSVPA QRLLAQELKD ILGDYLLTQP 480
  481 ANREEKQLPS PAALKKKIIV KHKKLPIESE DLAAVVKTDE FQDTEIISRE CVKKGILMVK 540
  541 NNNSHEWTSH VFILFPDRLC YLIQTADPEN PNDDTVSVSG DEEREEETPS GFGVKPEEMH 600
  601 VTEEWFHGRC ERDEAKKRIL EHKEKGNGLF MIRDSNLFIG DFSLSILHDG KVHHVRIRSK 660
  661 IIDKEKKYYF MDNKVCDTLY ELVSYYTRHY LTTAHFKMVL TIPCPQPQPH LNQPWFSATA 720
  721 DKEKAEELLS LVPEDGAFLI RTSSTDSSVY VLSLKVDGEF WHYRLKRDGR IFVVNQKVFE 780
  781 NLNQIVEFYA NREFVRGISL RFPVNEKDIS HLTAELAEAR TPGCYMDLKD LDKEVQARAL 840
  841 RPYRGTADDE LSFPANVIIT VLRKEEGLWR GRYGSLTGWF PSAHVQEILP EKVSTSETSN 900
  901 YNTIELAGTL IERIHDADRP NVIRISQSNQ HWMNKQYYLL AASSSEEADG WQNNLFELTR 960
  961 SVNTKMSILR TKEKEKRIAA ELSNLVVYCQ AVPFDPAHIY NDAFYEMCSF VEGKLDKLVE1020
 1021 KGLLPFNSRK LSRVYPNGSR ITSNNYSPVP MWNAGCHMVA LNYQTGDKPM QLNQGKFLAN1080
 1081 GRCGYLLKPD YMLTDDFDPT NTEKFATAYP IRLNVQVIGG RHLSRKDKNK GICSPFVEIE1140
 1141 IIGMPCDTKV FQTKTIASNG LNPIWNQTFT FEIQCPEVAL IRFHVEDGDF VGPKTDPFIG1200
 1201 QAVFPVDSIR CGFRSVPLKN QYSEELELSS LLVDVQMCSR EGTQLIRSSS HFLQASRLAP1260
 1261 VFAHRKITNG DSIPREMAPR LRTSATDRSL DSPTNSESRA TLLSGQRGSQ DSMDSAAETS1320
 1321 SIASGTISSR DGKKKQNWLK KFSFGKSSKS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle