YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE39201
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRFSVTRSL YHSIFIGLCV YILFLFNLSK TRLTPEERPA TYMKKNVFYQ SGNEATLDNC  60
   61 PWPISNVENV INRVSVLENS GKRYIFSDFG YSQGIGNLMF QVAGLLSIAR ETGSILLIPS 120
  121 TTTLRRAFDF ETTFNDSIQF VGEDLSRQLA EDLNASKITL TSCCAYRNLS TILFNDSRII 180
  181 ERIDGYFQNF RYFHPDSQKI VKKLFTFMDP VRKRVDEFLE NVGISLTVRN ARVIETNVAN 240
  241 DDQALELPEE DAFAKTMMVG VHIRHGMDIS MNSRNRIHGH VDTPIEYYKR AIQQISKIYE 300
  301 NVAFIICSDN VAWARRNLKL GKETLHFFCP GPREVDMAIL KSCDSVIIST GTFGWWSAYL 360
  361 NVNASPDVYY YKHWPAPGSV MEKMTNKTEY FLKSWTALE

Type	Start	End	Confidence
Cytoplasmic	1	8	0.86
Transmembrane Helix	9	28	0.91
Non-Cytoplasmic	29	399	0.93