YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE40466
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMDMMQMYF HFRIQEPILF RQWKPTDTTG YVFSCISLFF IAFCLELLKF GRQRMTRTVK  60
   61 EKLAVDCCCS TPEGIWEIPE EPEPSPRGKL ASLAPFTMES ISSWRHFASS FLFFLQNFVD 120
  121 YSLMLVAMTY NYPLFFSLLA GHAIGYFFVG PLMTVKEVEN TGNCCS

Type	Start	End	Confidence
Non-Cytoplasmic	1	28	0.91
Transmembrane Helix	29	50	0.90
Cytoplasmic	51	105	0.90
Transmembrane Helix	106	125	0.70
Non-Cytoplasmic	126	131	0.54
Transmembrane Helix	132	153	0.79
Cytoplasmic	154	166	0.75