YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	glct-5
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKLSWNLRH RPYNAQAILL GLFFFIILVK LYLDLTANPS FTRKIMEPSS KNSDASNRTI  60
   61 IVVTPTYKRI TRLPDMIRLA NTLAHVKNLH WIVVEDGYGI VPAVRELLEK TNLSYTYMAH 120
  121 KTAKGYPTRG WYQRTMALRY IRSSWSKILR EHDAVVYFAD DDNAYDVRLF TDYIRNVNTL 180
  181 GVWAVGLVGG AIVEAPKVVN HKVTGFNVRW SPNRRFAVDM AGFAINLKYI LNSDAVFGKD 240
  241 CKRGEGAPET CLIEDIGLDL EDIKPFGYDA TKVQDIMVWH TKTSPPEIEQ RDEPIDSLGY 300
  301 FVEY

Type	Start	End	Confidence
Cytoplasmic	1	12	0.87
Transmembrane Helix	13	33	0.89
Non-Cytoplasmic	34	304	0.93